Joint blind estimation of multiple frequency offsets and multiple channels is difficult in distributed Multiple Input Multiple Output Orthogonal Frequency Division Multiplexing (MIMO-OFDM) system under the multipath fading channel. In order to solve the problem, an effective algorithm was proposed. The proposed algorithm made use of blind deconvolution separation method to receive signal and got the multiple channels embedded with frequency offsets meanwhile. After estimating frequency offsets of the separated signals, the real channels estimation could be obtained by removing channel ambiguity and compensating the whole channels. The simulation results show that, the proposed algorithm is able to get 1e-6 average Mean Square Error (MSE) of frequency offsets estimation at 5 dB and 1e-2 average MSE of channels estimation at 15 dB compared with existing frequency offset channel estimation method based on pilot, the joint blind estimation of multiple frequency offsets and multiple channels for distributed MIMO-OFDM signal is realized